BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036D09LP1|AL430224
(925 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1663 1381 0.0
>3x_Contig1663
Length = 13533
Score = 1381 bits (689), Expect = 0.0
Identities = 878/919 (95%), Gaps = 25/919 (2%)
Strand = Plus / Plus
Query: 3 attcacaccaaggggagtaggtgtttcatcaattggtgcactcatatgcaggacttcata 62
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 1606 attcacaccaaggggagtaggtgtttcatcaattggtgcactcatatg-agga-ttcata 1663
Query: 63 tgtagagtttgagtggcggggwaawacggggcacgagcrtttgcasatagaggttgctgt 122
| |||||||||||||| |||| || | ||||||||||| |||| | | ||| | ||||
Sbjct: 1664 t-tagagtttgagtgg-ggggaaaaa-ggggcacgagcatttg-agaaagaatt--ctgt 1717
Query: 123 ccctcaacctctagagtgaggcaaactttgtgggatccttggttcgccttctctacgata 182
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1718 ccctcaacctctaga-tgaggcaaactttgtgggatccttggttcgccttctctacgata 1776
Query: 183 ttgttcgcgctgagacacagacgaaaaatcgccagattcagcaattgtctcataagtagc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1777 ttgttcgcgctgagacacagacgaaaaatcgccagattcagcaattgtctcataagtagc 1836
Query: 243 ttgttgtacgtttggtgcgattgaaaccagctgaagaattatwagcwggtccgttgtaat 302
||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 1837 ttgttgtacgtttggtg-gattgaaaccagctgaagaattataagcaggtccgttgtaat 1895
Query: 303 tagcgtttctgatacggatcgttggtgatttggctggctttgggggtattgtgctttaaa 362
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1896 tagcgttt-tgatacggat-gttggtgatttggctggctttgggggtattgtgctttaaa 1953
Query: 363 gtgggttctaccatgttctgaaggatggccccctggttcgtgtctgtgcggta-ctggtg 421
|||||||||||||||||||||||||||||||||||||| |||| || |||||| ||||||
Sbjct: 1954 gtgggttctaccatgttctgaaggatggccccctggtt-gtgt-tg-gcggtagctggtg 2010
Query: 422 ctgcttcaaactgctgatcagcttccgcgcgtgagtgtattgttttaatgagtmgttagg 481
|||||| |||||||||||||||||||| ||| ||||||||||||||||||||| ||||||
Sbjct: 2011 ctgctt-aaactgctgatcagcttccg-gcg-gagtgtattgttttaatgagtagttagg 2067
Query: 482 tccagattcctacagtgttggaatagttctcagcstmattttsctgatacctctctggtg 541
|||||||||| ||||||||||||||||||||||| | ||||| |||||||||||||||||
Sbjct: 2068 tccagattcc-acagtgttggaatagttctcagcgtaattttgctgatacctctctggtg 2126
Query: 542 ttccttgactttgatatctttcagggcgaagtgcatcgaggcgtgctataactgrgcaag 601
|||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||
Sbjct: 2127 ttccttgactttgatatctttcaggg-gaagg--atcgaggcgtgctataactg-gcaag 2182
Query: 602 gcactacctgkagcyartttgaggagctagagttcgtacctggctttcgtaattggctgg 661
|||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2183 gcactacctg-agctagtttgaggagctagagttcgtacctggctttcgtaattggctgg 2241
Query: 662 taacgcacctctttggtgattttgggatgacttgacgttagtttcagaaccttcatttat 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2242 taacgcacctctttggtgattttgggatgacttgacgttagtttcagaaccttcatttat 2301
Query: 722 caaaggttgacgagctgccggtggataagttctctgataagggttgtctgactgccgtat 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2302 caaaggttgacgagctgccggtggataagttctctgataagggttgtctgactgccgtat 2361
Query: 782 aggaggagtagaaggtgaccctgtcatccgttgttcccttgtagatgttggtaaggccga 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2362 aggaggagtagaaggtgaccctgtcatccgttgttcccttgtagatgttggtaaggccga 2421
Query: 842 ctgagcaatcattggctgcatccgtggagttggagtctgtttcggaagttcttcactgga 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2422 ctgagcaatcattggctgcatccgtggagttggagtctgtttcggaagttcttcactgga 2481
Query: 902 tgcattacttgtggtgttt 920
|||||||||||||||||||
Sbjct: 2482 tgcattacttgtggtgttt 2500
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4216
Number of Sequences: 1807
Number of extensions: 4216
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 925
length of database: 10,358,551
effective HSP length: 16
effective length of query: 909
effective length of database: 10,329,639
effective search space: 9389641851
effective search space used: 9389641851
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)